Application of digital image analysis on histological images of a murine embryoid body model for monitoring endothelial differentiation

Research output: Contribution to journalJournal articleResearchpeer-review

Standard

Application of digital image analysis on histological images of a murine embryoid body model for monitoring endothelial differentiation. / Mousavi, Nabi; Raft, Marie Birkvig; Truelsen, Sarah Line Bring; Timmermans, Vera; Thastrup, Jacob; Heegaard, Steffen.

In: Pathology Research and Practice, Vol. 216, No. 11, 153225, 2020.

Research output: Contribution to journalJournal articleResearchpeer-review

Harvard

Mousavi, N, Raft, MB, Truelsen, SLB, Timmermans, V, Thastrup, J & Heegaard, S 2020, 'Application of digital image analysis on histological images of a murine embryoid body model for monitoring endothelial differentiation', Pathology Research and Practice, vol. 216, no. 11, 153225. https://doi.org/10.1016/j.prp.2020.153225

APA

Mousavi, N., Raft, M. B., Truelsen, S. L. B., Timmermans, V., Thastrup, J., & Heegaard, S. (2020). Application of digital image analysis on histological images of a murine embryoid body model for monitoring endothelial differentiation. Pathology Research and Practice, 216(11), [153225]. https://doi.org/10.1016/j.prp.2020.153225

Vancouver

Mousavi N, Raft MB, Truelsen SLB, Timmermans V, Thastrup J, Heegaard S. Application of digital image analysis on histological images of a murine embryoid body model for monitoring endothelial differentiation. Pathology Research and Practice. 2020;216(11). 153225. https://doi.org/10.1016/j.prp.2020.153225

Author

Mousavi, Nabi ; Raft, Marie Birkvig ; Truelsen, Sarah Line Bring ; Timmermans, Vera ; Thastrup, Jacob ; Heegaard, Steffen. / Application of digital image analysis on histological images of a murine embryoid body model for monitoring endothelial differentiation. In: Pathology Research and Practice. 2020 ; Vol. 216, No. 11.

Bibtex

@article{5f7ff817c95347bfbbd5d1e0cc2507e9,
title = "Application of digital image analysis on histological images of a murine embryoid body model for monitoring endothelial differentiation",
abstract = "The in vitro 3D model established from murine pluripotential stem cells (i.e., embryoid bodies (EBs)) is a dynamic model for endothelial differentiation. The aim of the present study was to investigate whether digital image analysis (DIA) can be applied on histological sections of EBs in order to quantify endothelial differentiation over time. The EBs were established in suspension cultures for 21 days in three independent replicate experiments. At day 4, 6, 9, 14, 18, and 21, the EBs were fixed in formaldehyde, embedded in paraffin and immunohistochemically (IHC) stained for CD31. The IHC-stained slides were digitally scanned and analysed using the Visiopharm{\textregistered} Quantitative Digital Pathology software Oncotopix{\texttrademark}. The EBs developed CD31+ vascular-like structures during their differentiation. The quantitative DIA of the EBs showed that the log10 values of the relative CD31+ areas increased from −0.574 ± 0.470 (mean ± SD) at day 4 to 0.093 ± 0.688 (mean ± SD) at day 21 (p < 0.001). The approach presented in this study is a fast, quantitative and reproducible alternative method for an otherwise time-consuming and observer-dependent histological investigation. The future perspectives for such a system would be implementation of a modified version of the method on different 3D cultures and IHC markers.",
keywords = "3D cultures, CD31 differentiation, Digital pathology, Embryoid body, Murine pluripotential stem cells",
author = "Nabi Mousavi and Raft, {Marie Birkvig} and Truelsen, {Sarah Line Bring} and Vera Timmermans and Jacob Thastrup and Steffen Heegaard",
year = "2020",
doi = "10.1016/j.prp.2020.153225",
language = "English",
volume = "216",
journal = "Pathology, Research and Practice",
issn = "0344-0338",
publisher = "Elsevier GmbH - Urban und Fischer",
number = "11",

}

RIS

TY - JOUR

T1 - Application of digital image analysis on histological images of a murine embryoid body model for monitoring endothelial differentiation

AU - Mousavi, Nabi

AU - Raft, Marie Birkvig

AU - Truelsen, Sarah Line Bring

AU - Timmermans, Vera

AU - Thastrup, Jacob

AU - Heegaard, Steffen

PY - 2020

Y1 - 2020

N2 - The in vitro 3D model established from murine pluripotential stem cells (i.e., embryoid bodies (EBs)) is a dynamic model for endothelial differentiation. The aim of the present study was to investigate whether digital image analysis (DIA) can be applied on histological sections of EBs in order to quantify endothelial differentiation over time. The EBs were established in suspension cultures for 21 days in three independent replicate experiments. At day 4, 6, 9, 14, 18, and 21, the EBs were fixed in formaldehyde, embedded in paraffin and immunohistochemically (IHC) stained for CD31. The IHC-stained slides were digitally scanned and analysed using the Visiopharm® Quantitative Digital Pathology software Oncotopix™. The EBs developed CD31+ vascular-like structures during their differentiation. The quantitative DIA of the EBs showed that the log10 values of the relative CD31+ areas increased from −0.574 ± 0.470 (mean ± SD) at day 4 to 0.093 ± 0.688 (mean ± SD) at day 21 (p < 0.001). The approach presented in this study is a fast, quantitative and reproducible alternative method for an otherwise time-consuming and observer-dependent histological investigation. The future perspectives for such a system would be implementation of a modified version of the method on different 3D cultures and IHC markers.

AB - The in vitro 3D model established from murine pluripotential stem cells (i.e., embryoid bodies (EBs)) is a dynamic model for endothelial differentiation. The aim of the present study was to investigate whether digital image analysis (DIA) can be applied on histological sections of EBs in order to quantify endothelial differentiation over time. The EBs were established in suspension cultures for 21 days in three independent replicate experiments. At day 4, 6, 9, 14, 18, and 21, the EBs were fixed in formaldehyde, embedded in paraffin and immunohistochemically (IHC) stained for CD31. The IHC-stained slides were digitally scanned and analysed using the Visiopharm® Quantitative Digital Pathology software Oncotopix™. The EBs developed CD31+ vascular-like structures during their differentiation. The quantitative DIA of the EBs showed that the log10 values of the relative CD31+ areas increased from −0.574 ± 0.470 (mean ± SD) at day 4 to 0.093 ± 0.688 (mean ± SD) at day 21 (p < 0.001). The approach presented in this study is a fast, quantitative and reproducible alternative method for an otherwise time-consuming and observer-dependent histological investigation. The future perspectives for such a system would be implementation of a modified version of the method on different 3D cultures and IHC markers.

KW - 3D cultures

KW - CD31 differentiation

KW - Digital pathology

KW - Embryoid body

KW - Murine pluripotential stem cells

U2 - 10.1016/j.prp.2020.153225

DO - 10.1016/j.prp.2020.153225

M3 - Journal article

C2 - 32987302

AN - SCOPUS:85091575819

VL - 216

JO - Pathology, Research and Practice

JF - Pathology, Research and Practice

SN - 0344-0338

IS - 11

M1 - 153225

ER -

ID: 260990726