Meta-analysis of genome-wide association studies discovers multiple loci for chronic lymphocytic leukemia

Publikation: Bidrag til tidsskriftTidsskriftartikelForskningfagfællebedømt

  • Sonja I. Berndt
  • Nicola J. Camp
  • Christine F. Skibola
  • Joseph Vijai
  • Zhaoming Wang
  • Jian Gu
  • Alexandra Nieters
  • Rachel S. Kelly
  • Karin E. Smedby
  • Alain Monnereau
  • Wendy Cozen
  • Angela Cox
  • Sophia S. Wang
  • Qing Lan
  • Lauren R. Teras
  • Moara Machado
  • Meredith Yeager
  • Angela R. Brooks-Wilson
  • Patricia Hartge
  • Mark P. Purdue
  • Brenda M. Birmann
  • Claire M. Vajdic
  • Pierluigi Cocco
  • Yawei Zhang
  • Graham G. Giles
  • Anne Zeleniuch-Jacquotte
  • Charles Lawrence
  • Rebecca Montalvan
  • Laurie Burdett
  • Amy Hutchinson
  • Yuanqing Ye
  • Timothy G. Call
  • Tait D. Shanafelt
  • Anne J. Novak
  • Neil E. Kay
  • Mark Liebow
  • Julie M. Cunningham
  • Cristine Allmer
  • Hans Olov Adami
  • Mads Melbye
  • Bengt Glimelius
  • Ellen T. Chang
  • Martha Glenn
  • Karen Curtin
  • Lisa A. Cannon-Albright
  • W. Ryan Diver
  • Brian K. Link
  • George J. Weiner
  • Lucia Conde
  • Paige M. Bracci
  • Jacques Riby
  • Donna K. Arnett
  • Degui Zhi
  • Justin M. Leach
  • Elizabeth A. Holly
  • Rebecca D. Jackson
  • Lesley F. Tinker
  • Yolanda Benavente
  • Nuria Sala
  • Delphine Casabonne
  • Nikolaus Becker
  • Paolo Boffetta
  • Paul Brennan
  • Lenka Foretova
  • Marc Maynadie
  • James McKay
  • Anthony Staines
  • Kari G. Chaffee
  • Sara J. Achenbach
  • Celine M. Vachon
  • Lynn R. Goldin
  • Jose F. Leis
  • J. Brice Weinberg
  • Neil E. Caporaso
  • Aaron D. Norman
  • Anneclaire J. De Roos
  • Lindsay M. Morton
  • Richard K. Severson
  • Elio Riboli
  • Paolo Vineis
  • Rudolph Kaaks
  • Giovanna Masala
  • Elisabete Weiderpass
  • Maria Dolores Chirlaque
  • Roel C.H. Vermeulen
  • Ruth C. Travis
  • Melissa C. Southey
  • Roger L. Milne
  • Demetrius Albanes
  • Jarmo Virtamo
  • Stephanie Weinstein
  • Jacqueline Clavel
  • Tongzhang Zheng
  • Theodore R. Holford
  • Danylo J. Villano
  • Ann Maria
  • John J. Spinelli
  • Randy D. Gascoyne
  • Joseph M. Connors
  • Kimberly A. Bertrand
  • Edward Giovannucci
  • Peter Kraft
  • Anne Kricker
  • Jenny Turner
  • Maria Grazia Ennas
  • Giovanni M. Ferri
  • Lucia Miligi
  • Liming Liang
  • Baoshan Ma
  • Jinyan Huang
  • Simon Crouch
  • Ju Hyun Park
  • Nilanjan Chatterjee
  • Kari E. North
  • John A. Snowden
  • Josh Wright
  • Joseph F. Fraumeni
  • Kenneth Offit
  • Xifeng Wu
  • Silvia De Sanjose
  • James R. Cerhan
  • Stephen J. Chanock
  • Nathaniel Rothman
  • Susan L. Slager

Chronic lymphocytic leukemia (CLL) is a common lymphoid malignancy with strong heritability. To further understand the genetic susceptibility for CLL and identify common loci associated with risk, we conducted a meta-analysis of four genome-wide association studies (GWAS) composed of 3,100 cases and 7,667 controls with follow-up replication in 1,958 cases and 5,530 controls. Here we report three new loci at 3p24.1 (rs9880772, EOMES, P=2.55 × 10-11), 6p25.2 (rs73718779, SERPINB6, P=1.97 × 10-8) and 3q28 (rs9815073, LPP, P=3.62 × 10-8), as well as a new independent SNP at the known 2q13 locus (rs9308731, BCL2L11, P=1.00 × 10-11) in the combined analysis. We find suggestive evidence (P<5 × 10-7) for two additional new loci at 4q24 (rs10028805, BANK1, P=7.19 × 10-8) and 3p22.2 (rs1274963, CSRNP1, P=2.12 × 10-7). Pathway analyses of new and known CLL loci consistently show a strong role for apoptosis, providing further evidence for the importance of this biological pathway in CLL susceptibility.

OriginalsprogEngelsk
Artikelnummer10933
TidsskriftNature Communications
Vol/bind7
ISSN2041-1723
DOI
StatusUdgivet - 9 mar. 2016

ID: 258831152